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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911972.1_cds_XP_016461957.1_55232
CDS Infomation

[gene=LOC107785221] [db_xref=GeneID:107785221] [protein=probable serine/threonine-protein kinase At1g54610] [protein_id=XP_016461957.1] [location=join(157226..157630,158808..159092,159227..159544,159760..159987,160179..160276,160598..160706,160782..161231,161575..161692,161800..161810)] [gbkey=CDS]
Sequence

ATGGGTTGTGTCAGCTCCAAGCAGGCCACGGCCCATTCCCCGCCACACCACAATTACAAT
TCCTCCTCTATAAAAACTGCTGTTATTAACAGAAATGGAGAAATTATTAAAGATCCCAAT
TTGCAGCATGTTAATAAGAGTGGATTTGGCCCTTTGGAGAAGATTAAAGAGGAACCCGAA
AAGGAGAAGAAGGCGGAGTCTTTAATTCGAAGGAGTTCCTCGAATTCTAGAGGTTCCAAG
AAAGGGAGTAATGAAAAAAAGGCTAATTTTAGTATCAAATTTGGAAGGTTAACGGAAGGA
GAACATTTGGCTGCTGGTTGGCCCGCGTGGCTCACTGCTGTCGCGTCTGACGCTATTGAT
GGATGGCTGCCTCTAAGATCAGACGCGTTCGAGAGATTAGAAAAGATTGGACAAGGTACG
TACAGCAGTGTTTATCGTGCACGTGACATCGAGACTGGTAAAATGGTTGCCCTGAAGAAG
GTGAAATTTGACAATTTCCAGCCAGACAGTGTCAGATTTATGGCCCGAGAAATAACAATT
CTTCGCAAACTTGACCATCCAAATATCATGAAGCTGATCGGAATAGTCACTTCTCGGTTA
TCATGTTGCATATACCTTGTTTTCGAATACATGGAACATGACCTCTCTGGACTGTTGTCA
TGTCCTGACATCAAGTTCACTGATTCACAGATCAAATGTTATATGCGGCAGCTGCTGAGT
GGACTAGAGCATTGTCATTCCCGAGGTATAATGCACCGAGATATTAAAGCATCCAACGTT
TTGATAAACAATGAAGGAATTCTAAAGATAGCAGATTTTGGTCTTGCAAATTTCCTTAGT
GCTAGGCACAAGCAACCACTAACCAGCCGCGTAGTGACTTTATGGTATCGACCTCCTGAA
CTTCTGCTGGGATCCACAAATTATGGGCTAACGGTGGATTTGTGGAGTGCTGGTTGTGTT
TTTGCAGAGCTATTTTTCGGGAGGCCTCTCCTGAAAGGGAGGACTGAGGTTGAACAATTG
CACAAAATCTTCAAGCTCTGTGGTTCTCCATCTGACGAATACTGGAGAAAGTCTAAACTT
CCACTTGCGACAATTTTTAAACCCCAACATCCTTATGAGAGTACACTCCGAGATAGATGT
AAAGAATTACCAAAAACTGCTGTCAACCTTATAGAAACACTTCTTTCAATTGACCCTCAT
AGACGTGGAACTGCTACATCTGCTCATGATTCTGAGTATTTCAGTACAAAGCCTTATGCT
TGTGACCCGTCAAGCTTGCCTAAGTACCCCCCGAACAAGGAAATTGATGCAAAGTTCCGA
GAAGAAGCACGGAGAAAGAAGGCCAGTTCCACAGTGAAAGCATCTGGAGCTTCAAGAGAT
TCAAGAAATGTGCAAAAAGCTCTTCAAAAATCGAGCAACTTCGGCATAGTGGTCTCAACT
GAGGAAGCTGAAGCCAATATTCACAATGGCCGTAGAAACAATGGTGGTAGCGGCCATATT
TCTAAAGGAAAAGGAGCTACCGTGGCACGTATATCAATGAAACCATCTTATGATACAGTG
TCAGAGGCTTCTCAGATGACCGAAGAATCTCAAGGCGAAAGCATTCGATCTGTCCCTGCT
CAAATGACAGCGTCAAGTGGCGTTACCTGGGCGAAAAAGAGAAAGCAAGATTCTGCAGCC
ACAAGGCCACATCCACAGGACAATTCAAGAAGTCAAAAGTTTATTGCCTTTGATCTTTCC
AATGTACTACATGCTGCAGATACCTCAGATTTAAACATGCAAGATAGTTATGACTTTTCT
AGCAGGATCAACACTGAAGCCAGAGGCCGCAACAATGACGCCACGCATTCTATTGGCAGG
CAATATACTCACGAGTCTCAAGAATTGTCAGAGGACTACAATGGCAAACAAAAAAGGGTT
GGGTTCTCAGGACCATTGATACAACAGAGGAGTGATGCAAAGCACGATAATCAAACTCGC
CAAGATGGTCGCAGATCCCGGTTTTATAGAGATTTACAATGA

Peptide Sequence

PEP ID

XP_016461957.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana tabacum]
Sequence

MGCVSSKQATAHSPPHHNYNSSSIKTAVINRNGEIIKDPNLQHVNKSGFGPLEKIKEEPE
KEKKAESLIRRSSSNSRGSKKGSNEKKANFSIKFGRLTEGEHLAAGWPAWLTAVASDAID
GWLPLRSDAFERLEKIGQGTYSSVYRARDIETGKMVALKKVKFDNFQPDSVRFMAREITI
LRKLDHPNIMKLIGIVTSRLSCCIYLVFEYMEHDLSGLLSCPDIKFTDSQIKCYMRQLLS
GLEHCHSRGIMHRDIKASNVLINNEGILKIADFGLANFLSARHKQPLTSRVVTLWYRPPE
LLLGSTNYGLTVDLWSAGCVFAELFFGRPLLKGRTEVEQLHKIFKLCGSPSDEYWRKSKL
PLATIFKPQHPYESTLRDRCKELPKTAVNLIETLLSIDPHRRGTATSAHDSEYFSTKPYA
CDPSSLPKYPPNKEIDAKFREEARRKKASSTVKASGASRDSRNVQKALQKSSNFGIVVST
EEAEANIHNGRRNNGGSGHISKGKGATVARISMKPSYDTVSEASQMTEESQGESIRSVPA
QMTASSGVTWAKKRKQDSAATRPHPQDNSRSQKFIAFDLSNVLHAADTSDLNMQDSYDFS
SRINTEARGRNNDATHSIGRQYTHESQELSEDYNGKQKRVGFSGPLIQQRSDAKHDNQTR
QDGRRSRFYRDLQ

Transcript Sequence

Gene sequence data has not been registered.